Alzheimer's Disease

Clustering Alzheimer’s Disease Subtypes via Similarity Learning and Graph Diffusion

Alzheimer’s disease (AD), a complex neurodegenerative disorder affecting millions globally, presents diagnostic and treatment challenges due to its heterogeneous nature. This study targets the identification of homogeneous AD subtypes with unique clinical and pathological characteristics to overcome these issues. Using an innovative approach with unsupervised clustering, the multi-kernel similarity learning framework SIMLR, and graph diffusion, we analyzed MRI-derived cortical thickness measurements in 829 patients with AD and mild cognitive impairment (MCI). The unique clustering methodology we used, untested in AD subtyping before, outperformed traditional clustering methods, notably mitigating noise interference in subtype detection. Five distinctive subtypes emerged, differing significantly in biomarkers, cognitive status, and other clinical features. A subsequent genetic association study validated these subtypes, uncovering potential genetic connections.

Penn Artificial Intelligence Technology Collaboratory for Healthy Aging

I worked as a research assistant in this project. Through engagement and collaboration with stakeholders and academic/industry experts, I applied text mining to build a portal for AD research to create a central resource and knowledge base for technology identification and training.

Early Alzheimer’s Disease Prediction

This was my first time using Magnetic Resonance Imaging (MRI) data for both demented and nondemented adults to build classifiers that predicts whether a subject will be diagnosed to develop dementia. Two datasets are used: one deals with cross-sectional MRI data for adults aged between 18 to 96, and the other deals with longitudinal MRI data for older adults between 60 to 96.